Cluster: HRGMv2_4099_CGC9
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_4099
- CGC Family ID: CGCFAM_00015
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4099_189 | HRGMv2_4099_189_11 | 10484 | 12262 | + | 3.A.1.106.8 |
| TC | HRGMv2_4099_189 | HRGMv2_4099_189_12 | 12255 | 14159 | + | 3.A.1.135.5 |
| pfam | HRGMv2_4099_189 | HRGMv2_4099_189_13 | 14541 | 15647 | - | Epimerase_2 |
| TC | HRGMv2_4099_189 | HRGMv2_4099_189_14 | 15687 | 17225 | - | 2.A.66.1.40 |
| CAZyme | HRGMv2_4099_189 | HRGMv2_4099_189_15 | 17203 | 18390 | - | GH105 |
| pfam | HRGMv2_4099_189 | HRGMv2_4099_189_16 | 18387 | 19544 | - | PS_pyruv_trans |
| CAZyme | HRGMv2_4099_189 | HRGMv2_4099_189_17 | 19554 | 20426 | - | GT2 |
| CAZyme | HRGMv2_4099_189 | HRGMv2_4099_189_18 | 20429 | 21412 | - | GT2 |
| NULL(UNKNOWN) | HRGMv2_4099_189 | HRGMv2_4099_189_19 | 21422 | 21571 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4099_189 | HRGMv2_4099_189_20 | 21589 | 22440 | - | GT2 |
Gene ID: HRGMv2_4099_189_11
Type: TC
Location: 10484 - 12262 (+)
Type: TC
Location: 10484 - 12262 (+)
Gene ID: HRGMv2_4099_189_12
Type: TC
Location: 12255 - 14159 (+)
Type: TC
Location: 12255 - 14159 (+)
Gene ID: HRGMv2_4099_189_13
Type: pfam
Location: 14541 - 15647 (-)
Type: pfam
Location: 14541 - 15647 (-)
Gene ID: HRGMv2_4099_189_14
Type: TC
Location: 15687 - 17225 (-)
Type: TC
Location: 15687 - 17225 (-)
Gene ID: HRGMv2_4099_189_15
Type: CAZyme
Location: 17203 - 18390 (-)
Type: CAZyme
Location: 17203 - 18390 (-)
Gene ID: HRGMv2_4099_189_16
Type: pfam
Location: 18387 - 19544 (-)
Type: pfam
Location: 18387 - 19544 (-)
Gene ID: HRGMv2_4099_189_17
Type: CAZyme
Location: 19554 - 20426 (-)
Type: CAZyme
Location: 19554 - 20426 (-)
Gene ID: HRGMv2_4099_189_18
Type: CAZyme
Location: 20429 - 21412 (-)
Type: CAZyme
Location: 20429 - 21412 (-)
Gene ID: HRGMv2_4099_189_19
Type:
Location: 21422 - 21571 (-)
Type:
Location: 21422 - 21571 (-)
Gene ID: HRGMv2_4099_189_20
Type: CAZyme
Location: 21589 - 22440 (-)
Type: CAZyme
Location: 21589 - 22440 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-138
Genus
PeH17
Species
PeH17 sp004556165
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.