dbCAN Logo

Cluster: HRGMv2_4099_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4099_189 HRGMv2_4099_189_27 26389 27513 - GT4
CAZyme HRGMv2_4099_189 HRGMv2_4099_189_28 27538 28653 - GT2
CAZyme HRGMv2_4099_189 HRGMv2_4099_189_29 28634 29539 - GT2
CAZyme HRGMv2_4099_189 HRGMv2_4099_189_30 29541 30650 - GT4
pfam HRGMv2_4099_189 HRGMv2_4099_189_31 30669 31760 - EpsG
TC HRGMv2_4099_189 HRGMv2_4099_189_32 31926 33404 - 3.B.1.1.6
TC HRGMv2_4099_189 HRGMv2_4099_189_33 33439 34632 - 3.B.1.1.2
TC HRGMv2_4099_189 HRGMv2_4099_189_34 34629 34994 - 3.B.1.1.3
Gene ID: HRGMv2_4099_189_27
Type: CAZyme
Location: 26389 - 27513 (-)
Gene ID: HRGMv2_4099_189_28
Type: CAZyme
Location: 27538 - 28653 (-)
Gene ID: HRGMv2_4099_189_29
Type: CAZyme
Location: 28634 - 29539 (-)
Gene ID: HRGMv2_4099_189_30
Type: CAZyme
Location: 29541 - 30650 (-)
Gene ID: HRGMv2_4099_189_31
Type: pfam
Location: 30669 - 31760 (-)
Gene ID: HRGMv2_4099_189_32
Type: TC
Location: 31926 - 33404 (-)
Gene ID: HRGMv2_4099_189_33
Type: TC
Location: 33439 - 34632 (-)
Gene ID: HRGMv2_4099_189_34
Type: TC
Location: 34629 - 34994 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Christensenellales
→
Family
CAG-138
→
Genus
PeH17
→
Species
PeH17 sp004556165

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_4099_189_32 vegetarian > vegan 1.33250 0.01287

🧭 Explore Read Mapping of CGC

← Back to Cluster List