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Cluster: HRGMv2_4097_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4097_1 HRGMv2_4097_1_136 151904 155836 + GH3
NULL(UNKNOWN) HRGMv2_4097_1 HRGMv2_4097_1_137 155967 156911 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4097_1 HRGMv2_4097_1_138 156976 159969 + GH3
pfam HRGMv2_4097_1 HRGMv2_4097_1_139 160084 161286 - Phage_int_SAM_3 | Phage_int_M
CAZyme HRGMv2_4097_1 HRGMv2_4097_1_140 162196 166434 + GH3
TC HRGMv2_4097_1 HRGMv2_4097_1_141 166549 167841 + 1.C.39.4.6
NULL(UNKNOWN) HRGMv2_4097_1 HRGMv2_4097_1_142 167838 168425 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_4097_1 HRGMv2_4097_1_143 168441 168872 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4097_1 HRGMv2_4097_1_144 168865 171816 + GH3
Gene ID: HRGMv2_4097_1_136
Type: CAZyme
Location: 151904 - 155836 (+)
Gene ID: HRGMv2_4097_1_137
Type:
Location: 155967 - 156911 (+)
Gene ID: HRGMv2_4097_1_138
Type: CAZyme
Location: 156976 - 159969 (+)
Gene ID: HRGMv2_4097_1_139
Type: pfam
Location: 160084 - 161286 (-)
Gene ID: HRGMv2_4097_1_140
Type: CAZyme
Location: 162196 - 166434 (+)
Gene ID: HRGMv2_4097_1_141
Type: TC
Location: 166549 - 167841 (+)
Gene ID: HRGMv2_4097_1_142
Type:
Location: 167838 - 168425 (+)
Gene ID: HRGMv2_4097_1_143
Type:
Location: 168441 - 168872 (+)
Gene ID: HRGMv2_4097_1_144
Type: CAZyme
Location: 168865 - 171816 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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