Cluster: HRGMv2_4096_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4096
- CGC Family ID: CGCFAM_01302
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4096_11 | HRGMv2_4096_11_35 | 39415 | 40224 | + | GT2 |
| STP | HRGMv2_4096_11 | HRGMv2_4096_11_36 | 40362 | 40886 | + | Sigma70_r2 | Sigma70_r4_2 |
| NULL(UNKNOWN) | HRGMv2_4096_11 | HRGMv2_4096_11_37 | 40879 | 42228 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4096_11 | HRGMv2_4096_11_38 | 42404 | 43108 | - | 3.A.1.4.10 |
| TC | HRGMv2_4096_11 | HRGMv2_4096_11_39 | 43112 | 43963 | - | 3.A.1.4.10 |
| TC | HRGMv2_4096_11 | HRGMv2_4096_11_40 | 43960 | 45039 | - | 3.A.1.4.8 |
| TC | HRGMv2_4096_11 | HRGMv2_4096_11_41 | 45050 | 45808 | - | 3.A.1.4.10 |
Gene ID: HRGMv2_4096_11_35
Type: CAZyme
Location: 39415 - 40224 (+)
Type: CAZyme
Location: 39415 - 40224 (+)
Gene ID: HRGMv2_4096_11_36
Type: STP
Location: 40362 - 40886 (+)
Type: STP
Location: 40362 - 40886 (+)
Gene ID: HRGMv2_4096_11_37
Type:
Location: 40879 - 42228 (+)
Type:
Location: 40879 - 42228 (+)
Gene ID: HRGMv2_4096_11_38
Type: TC
Location: 42404 - 43108 (-)
Type: TC
Location: 42404 - 43108 (-)
Gene ID: HRGMv2_4096_11_39
Type: TC
Location: 43112 - 43963 (-)
Type: TC
Location: 43112 - 43963 (-)
Gene ID: HRGMv2_4096_11_40
Type: TC
Location: 43960 - 45039 (-)
Type: TC
Location: 43960 - 45039 (-)
Gene ID: HRGMv2_4096_11_41
Type: TC
Location: 45050 - 45808 (-)
Type: TC
Location: 45050 - 45808 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Ventricola
Species
Ventricola intestinavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.