Cluster: HRGMv2_4096_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4096
- CGC Family ID: CGCFAM_00409
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4096_5 | HRGMv2_4096_5_42 | 42405 | 43094 | - | 3.A.1.125.3 |
| STP | HRGMv2_4096_5 | HRGMv2_4096_5_43 | 43188 | 44177 | - | HATPase_c | HisKA |
| TF | HRGMv2_4096_5 | HRGMv2_4096_5_44 | 44164 | 44850 | - | Trans_reg_C |
| CAZyme | HRGMv2_4096_5 | HRGMv2_4096_5_45 | 45093 | 46001 | + | GH43_33 |
Gene ID: HRGMv2_4096_5_42
Type: TC
Location: 42405 - 43094 (-)
Type: TC
Location: 42405 - 43094 (-)
Gene ID: HRGMv2_4096_5_43
Type: STP
Location: 43188 - 44177 (-)
Type: STP
Location: 43188 - 44177 (-)
Gene ID: HRGMv2_4096_5_44
Type: TF
Location: 44164 - 44850 (-)
Type: TF
Location: 44164 - 44850 (-)
Gene ID: HRGMv2_4096_5_45
Type: CAZyme
Location: 45093 - 46001 (+)
Type: CAZyme
Location: 45093 - 46001 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Ventricola
Species
Ventricola intestinavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.