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Cluster: HRGMv2_4096_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4096_4 HRGMv2_4096_4_32 35471 36835 - 2.A.66.1.33
NULL(UNKNOWN) HRGMv2_4096_4 HRGMv2_4096_4_33 37152 37922 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4096_4 HRGMv2_4096_4_34 37929 39056 - GH88
CAZyme HRGMv2_4096_4 HRGMv2_4096_4_35 39040 40860 - GH154
CAZyme HRGMv2_4096_4 HRGMv2_4096_4_36 40867 42690 - PL33_1
TC HRGMv2_4096_4 HRGMv2_4096_4_37 42711 43574 - 3.A.1.1.39
TC HRGMv2_4096_4 HRGMv2_4096_4_38 43594 44538 - 3.A.1.1.20
STP HRGMv2_4096_4 HRGMv2_4096_4_39 44714 45964 - SBP_bac_1
TF HRGMv2_4096_4 HRGMv2_4096_4_40 46301 47353 + LacI
CAZyme HRGMv2_4096_4 HRGMv2_4096_4_41 47592 49778 + GH28
Gene ID: HRGMv2_4096_4_32
Type: TC
Location: 35471 - 36835 (-)
Gene ID: HRGMv2_4096_4_33
Type:
Location: 37152 - 37922 (-)
Gene ID: HRGMv2_4096_4_34
Type: CAZyme
Location: 37929 - 39056 (-)
Gene ID: HRGMv2_4096_4_35
Type: CAZyme
Location: 39040 - 40860 (-)
Gene ID: HRGMv2_4096_4_36
Type: CAZyme
Location: 40867 - 42690 (-)
Gene ID: HRGMv2_4096_4_37
Type: TC
Location: 42711 - 43574 (-)
Gene ID: HRGMv2_4096_4_38
Type: TC
Location: 43594 - 44538 (-)
Gene ID: HRGMv2_4096_4_39
Type: STP
Location: 44714 - 45964 (-)
Gene ID: HRGMv2_4096_4_40
Type: TF
Location: 46301 - 47353 (+)
Gene ID: HRGMv2_4096_4_41
Type: CAZyme
Location: 47592 - 49778 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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