Cluster: HRGMv2_4096_CGC32
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4096
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4096_131 | HRGMv2_4096_131_2 | 982 | 2082 | + | 3.B.1.1.5 |
| NULL(UNKNOWN) | HRGMv2_4096_131 | HRGMv2_4096_131_3 | 2134 | 2274 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4096_131 | HRGMv2_4096_131_4 | 2549 | 3190 | + | Hydrolase | HAD_2 |
| CAZyme | HRGMv2_4096_131 | HRGMv2_4096_131_5 | 3325 | 5529 | - | GH36 |
| CAZyme | HRGMv2_4096_131 | HRGMv2_4096_131_6 | 5487 | 6467 | - | GH113 |
Gene ID: HRGMv2_4096_131_2
Type: TC
Location: 982 - 2082 (+)
Type: TC
Location: 982 - 2082 (+)
Gene ID: HRGMv2_4096_131_3
Type:
Location: 2134 - 2274 (+)
Type:
Location: 2134 - 2274 (+)
Gene ID: HRGMv2_4096_131_4
Type: pfam
Location: 2549 - 3190 (+)
Type: pfam
Location: 2549 - 3190 (+)
Gene ID: HRGMv2_4096_131_5
Type: CAZyme
Location: 3325 - 5529 (-)
Type: CAZyme
Location: 3325 - 5529 (-)
Gene ID: HRGMv2_4096_131_6
Type: CAZyme
Location: 5487 - 6467 (-)
Type: CAZyme
Location: 5487 - 6467 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Ventricola
Species
Ventricola intestinavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.