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Cluster: HRGMv2_4096_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4096_83 HRGMv2_4096_83_2 1899 3674 + 8.A.59.2.1
TF HRGMv2_4096_83 HRGMv2_4096_83_3 3667 5238 + HTH_AraC | HTH_AraC
STP HRGMv2_4096_83 HRGMv2_4096_83_4 5321 6637 + SBP_bac_1
TC HRGMv2_4096_83 HRGMv2_4096_83_5 6724 7608 + 3.A.1.1.20
TC HRGMv2_4096_83 HRGMv2_4096_83_6 7713 8564 + 3.A.1.1.34
sulfatase HRGMv2_4096_83 HRGMv2_4096_83_7 8573 10003 + S1_24
pfam HRGMv2_4096_83 HRGMv2_4096_83_8 9987 10901 + DHDPS
CAZyme HRGMv2_4096_83 HRGMv2_4096_83_9 10904 12412 + GH165
Gene ID: HRGMv2_4096_83_2
Type: TC
Location: 1899 - 3674 (+)
Gene ID: HRGMv2_4096_83_3
Type: TF
Location: 3667 - 5238 (+)
Gene ID: HRGMv2_4096_83_4
Type: STP
Location: 5321 - 6637 (+)
Gene ID: HRGMv2_4096_83_5
Type: TC
Location: 6724 - 7608 (+)
Gene ID: HRGMv2_4096_83_6
Type: TC
Location: 7713 - 8564 (+)
Gene ID: HRGMv2_4096_83_7
Type: sulfatase
Location: 8573 - 10003 (+)
Gene ID: HRGMv2_4096_83_8
Type: pfam
Location: 9987 - 10901 (+)
Gene ID: HRGMv2_4096_83_9
Type: CAZyme
Location: 10904 - 12412 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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