Cluster: HRGMv2_4096_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4096
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4096_4 | HRGMv2_4096_4_15 | 12632 | 14515 | - | GH2 |
| TC | HRGMv2_4096_4 | HRGMv2_4096_4_16 | 14729 | 15430 | + | 3.A.1.122.7 |
| TC | HRGMv2_4096_4 | HRGMv2_4096_4_17 | 15424 | 17733 | + | 3.A.1.137.2 |
| pfam | HRGMv2_4096_4 | HRGMv2_4096_4_18 | 17846 | 18883 | + | HlyD_3 | HlyD_D23 |
| STP | HRGMv2_4096_4 | HRGMv2_4096_4_19 | 19069 | 19653 | + | TetR_N |
| TC | HRGMv2_4096_4 | HRGMv2_4096_4_20 | 19924 | 21282 | - | 1.A.26.1.2 |
Gene ID: HRGMv2_4096_4_15
Type: CAZyme
Location: 12632 - 14515 (-)
Type: CAZyme
Location: 12632 - 14515 (-)
Gene ID: HRGMv2_4096_4_16
Type: TC
Location: 14729 - 15430 (+)
Type: TC
Location: 14729 - 15430 (+)
Gene ID: HRGMv2_4096_4_17
Type: TC
Location: 15424 - 17733 (+)
Type: TC
Location: 15424 - 17733 (+)
Gene ID: HRGMv2_4096_4_18
Type: pfam
Location: 17846 - 18883 (+)
Type: pfam
Location: 17846 - 18883 (+)
Gene ID: HRGMv2_4096_4_19
Type: STP
Location: 19069 - 19653 (+)
Type: STP
Location: 19069 - 19653 (+)
Gene ID: HRGMv2_4096_4_20
Type: TC
Location: 19924 - 21282 (-)
Type: TC
Location: 19924 - 21282 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Ventricola
Species
Ventricola intestinavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.