Cluster: HRGMv2_4096_CGC29
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4096
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4096_80 | HRGMv2_4096_80_3 | 4443 | 7553 | + | GH38 |
| TF | HRGMv2_4096_80 | HRGMv2_4096_80_4 | 7656 | 8153 | - | HTH_AraC | HTH_AraC |
| pfam | HRGMv2_4096_80 | HRGMv2_4096_80_5 | 8458 | 9558 | + | GFO_IDH_MocA |
| TC | HRGMv2_4096_80 | HRGMv2_4096_80_6 | 9677 | 11422 | - | 3.A.1.21.1 |
| TC | HRGMv2_4096_80 | HRGMv2_4096_80_7 | 11436 | 13208 | - | 3.A.1.21.1 |
Gene ID: HRGMv2_4096_80_3
Type: CAZyme
Location: 4443 - 7553 (+)
Type: CAZyme
Location: 4443 - 7553 (+)
Gene ID: HRGMv2_4096_80_4
Type: TF
Location: 7656 - 8153 (-)
Type: TF
Location: 7656 - 8153 (-)
Gene ID: HRGMv2_4096_80_5
Type: pfam
Location: 8458 - 9558 (+)
Type: pfam
Location: 8458 - 9558 (+)
Gene ID: HRGMv2_4096_80_6
Type: TC
Location: 9677 - 11422 (-)
Type: TC
Location: 9677 - 11422 (-)
Gene ID: HRGMv2_4096_80_7
Type: TC
Location: 11436 - 13208 (-)
Type: TC
Location: 11436 - 13208 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Ventricola
Species
Ventricola intestinavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.