Cluster: HRGMv2_4096_CGC28
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_4096
- CGC Family ID: CGCFAM_00005
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4096_76 | HRGMv2_4096_76_1 | 240 | 1271 | + | GT2 |
| CAZyme | HRGMv2_4096_76 | HRGMv2_4096_76_2 | 1268 | 2386 | + | GT4 |
| CAZyme | HRGMv2_4096_76 | HRGMv2_4096_76_3 | 2447 | 3649 | + | GT4 |
| pfam | HRGMv2_4096_76 | HRGMv2_4096_76_4 | 3695 | 5035 | + | Wzy_C |
| CAZyme | HRGMv2_4096_76 | HRGMv2_4096_76_5 | 5068 | 6090 | + | GT2 |
| TC | HRGMv2_4096_76 | HRGMv2_4096_76_6 | 6167 | 6802 | + | 9.B.18.1.3 |
Gene ID: HRGMv2_4096_76_1
Type: CAZyme
Location: 240 - 1271 (+)
Type: CAZyme
Location: 240 - 1271 (+)
Gene ID: HRGMv2_4096_76_2
Type: CAZyme
Location: 1268 - 2386 (+)
Type: CAZyme
Location: 1268 - 2386 (+)
Gene ID: HRGMv2_4096_76_3
Type: CAZyme
Location: 2447 - 3649 (+)
Type: CAZyme
Location: 2447 - 3649 (+)
Gene ID: HRGMv2_4096_76_4
Type: pfam
Location: 3695 - 5035 (+)
Type: pfam
Location: 3695 - 5035 (+)
Gene ID: HRGMv2_4096_76_5
Type: CAZyme
Location: 5068 - 6090 (+)
Type: CAZyme
Location: 5068 - 6090 (+)
Gene ID: HRGMv2_4096_76_6
Type: TC
Location: 6167 - 6802 (+)
Type: TC
Location: 6167 - 6802 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Ventricola
Species
Ventricola intestinavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.