Cluster: HRGMv2_4096_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4096
- CGC Family ID: CGCFAM_00752
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4096_45 | HRGMv2_4096_45_12 | 10225 | 12534 | + | GH3 |
| pfam | HRGMv2_4096_45 | HRGMv2_4096_45_13 | 12849 | 14927 | + | GTP_EFTU | EFG_C | EFG_IV | EFG_III | EF-G_D2 |
| STP | HRGMv2_4096_45 | HRGMv2_4096_45_14 | 15351 | 16946 | + | HD |
| TC | HRGMv2_4096_45 | HRGMv2_4096_45_15 | 17319 | 20504 | + | 9.B.34.1.2 |
Gene ID: HRGMv2_4096_45_12
Type: CAZyme
Location: 10225 - 12534 (+)
Type: CAZyme
Location: 10225 - 12534 (+)
Gene ID: HRGMv2_4096_45_13
Type: pfam
Location: 12849 - 14927 (+)
Type: pfam
Location: 12849 - 14927 (+)
Gene ID: HRGMv2_4096_45_14
Type: STP
Location: 15351 - 16946 (+)
Type: STP
Location: 15351 - 16946 (+)
Gene ID: HRGMv2_4096_45_15
Type: TC
Location: 17319 - 20504 (+)
Type: TC
Location: 17319 - 20504 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Ventricola
Species
Ventricola intestinavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.