Cluster: HRGMv2_4096_CGC21
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4096
- CGC Family ID: CGCFAM_00100
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4096_40 | HRGMv2_4096_40_2 | 1111 | 2811 | + | GH63 |
| pfam | HRGMv2_4096_40 | HRGMv2_4096_40_3 | 3282 | 3698 | - | ATP-synt_DE | ATP-synt_DE_N |
| TC | HRGMv2_4096_40 | HRGMv2_4096_40_4 | 3691 | 5988 | - | 3.A.2.1.5 |
| TC | HRGMv2_4096_40 | HRGMv2_4096_40_5 | 5992 | 7503 | - | 3.A.2.1.1 |
| pfam | HRGMv2_4096_40 | HRGMv2_4096_40_6 | 7517 | 8200 | - | OSCP | ATP-synt_B |
| pfam | HRGMv2_4096_40 | HRGMv2_4096_40_7 | 8214 | 8441 | - | ATP-synt_C |
| TC | HRGMv2_4096_40 | HRGMv2_4096_40_8 | 8559 | 9449 | - | 3.A.2.1.5 |
Gene ID: HRGMv2_4096_40_2
Type: CAZyme
Location: 1111 - 2811 (+)
Type: CAZyme
Location: 1111 - 2811 (+)
Gene ID: HRGMv2_4096_40_3
Type: pfam
Location: 3282 - 3698 (-)
Type: pfam
Location: 3282 - 3698 (-)
Gene ID: HRGMv2_4096_40_4
Type: TC
Location: 3691 - 5988 (-)
Type: TC
Location: 3691 - 5988 (-)
Gene ID: HRGMv2_4096_40_5
Type: TC
Location: 5992 - 7503 (-)
Type: TC
Location: 5992 - 7503 (-)
Gene ID: HRGMv2_4096_40_6
Type: pfam
Location: 7517 - 8200 (-)
Type: pfam
Location: 7517 - 8200 (-)
Gene ID: HRGMv2_4096_40_7
Type: pfam
Location: 8214 - 8441 (-)
Type: pfam
Location: 8214 - 8441 (-)
Gene ID: HRGMv2_4096_40_8
Type: TC
Location: 8559 - 9449 (-)
Type: TC
Location: 8559 - 9449 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Ventricola
Species
Ventricola intestinavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.