Cluster: HRGMv2_4096_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4096
- CGC Family ID: CGCFAM_00092
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4096_39 | HRGMv2_4096_39_2 | 572 | 1126 | + | 2.A.107.1.2 |
| CAZyme | HRGMv2_4096_39 | HRGMv2_4096_39_3 | 1261 | 3426 | - | GH112 |
| pfam | HRGMv2_4096_39 | HRGMv2_4096_39_4 | 3451 | 3630 | - | DUF6903 |
| TC | HRGMv2_4096_39 | HRGMv2_4096_39_5 | 3637 | 4524 | - | 3.A.1.1.25 |
| TC | HRGMv2_4096_39 | HRGMv2_4096_39_6 | 4540 | 5436 | - | 3.A.1.1.18 |
Gene ID: HRGMv2_4096_39_2
Type: TC
Location: 572 - 1126 (+)
Type: TC
Location: 572 - 1126 (+)
Gene ID: HRGMv2_4096_39_3
Type: CAZyme
Location: 1261 - 3426 (-)
Type: CAZyme
Location: 1261 - 3426 (-)
Gene ID: HRGMv2_4096_39_4
Type: pfam
Location: 3451 - 3630 (-)
Type: pfam
Location: 3451 - 3630 (-)
Gene ID: HRGMv2_4096_39_5
Type: TC
Location: 3637 - 4524 (-)
Type: TC
Location: 3637 - 4524 (-)
Gene ID: HRGMv2_4096_39_6
Type: TC
Location: 4540 - 5436 (-)
Type: TC
Location: 4540 - 5436 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Ventricola
Species
Ventricola intestinavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.