Cluster: HRGMv2_4096_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4096
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4096_27 | HRGMv2_4096_27_14 | 13925 | 15085 | - | GT4 |
| peptidase | HRGMv2_4096_27 | HRGMv2_4096_27_15 | 15517 | 16473 | + | M14.UNW |
| pfam | HRGMv2_4096_27 | HRGMv2_4096_27_16 | 16470 | 17405 | + | AstE_AspA_cat |
| TC | HRGMv2_4096_27 | HRGMv2_4096_27_17 | 17433 | 19232 | + | 3.A.1.106.3 |
| STP | HRGMv2_4096_27 | HRGMv2_4096_27_18 | 19346 | 20170 | + | SBP_bac_1 |
| TC | HRGMv2_4096_27 | HRGMv2_4096_27_19 | 20400 | 21071 | + | 3.A.1.8.1 |
| TC | HRGMv2_4096_27 | HRGMv2_4096_27_20 | 21068 | 22153 | + | 3.A.1.19.5 |
Gene ID: HRGMv2_4096_27_14
Type: CAZyme
Location: 13925 - 15085 (-)
Type: CAZyme
Location: 13925 - 15085 (-)
Gene ID: HRGMv2_4096_27_15
Type: peptidase
Location: 15517 - 16473 (+)
Type: peptidase
Location: 15517 - 16473 (+)
Gene ID: HRGMv2_4096_27_16
Type: pfam
Location: 16470 - 17405 (+)
Type: pfam
Location: 16470 - 17405 (+)
Gene ID: HRGMv2_4096_27_17
Type: TC
Location: 17433 - 19232 (+)
Type: TC
Location: 17433 - 19232 (+)
Gene ID: HRGMv2_4096_27_18
Type: STP
Location: 19346 - 20170 (+)
Type: STP
Location: 19346 - 20170 (+)
Gene ID: HRGMv2_4096_27_19
Type: TC
Location: 20400 - 21071 (+)
Type: TC
Location: 20400 - 21071 (+)
Gene ID: HRGMv2_4096_27_20
Type: TC
Location: 21068 - 22153 (+)
Type: TC
Location: 21068 - 22153 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Ventricola
Species
Ventricola intestinavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.