Cluster: HRGMv2_4096_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_4096
- CGC Family ID: CGCFAM_01300
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4096_26 | HRGMv2_4096_26_14 | 15976 | 16899 | + | GT2 |
| CAZyme | HRGMv2_4096_26 | HRGMv2_4096_26_15 | 16859 | 17788 | + | GT2 |
| TC | HRGMv2_4096_26 | HRGMv2_4096_26_16 | 17819 | 19273 | + | 3.A.1.103.2 |
| TC | HRGMv2_4096_26 | HRGMv2_4096_26_17 | 19286 | 20014 | + | 3.A.1.103.5 |
| CAZyme | HRGMv2_4096_26 | HRGMv2_4096_26_18 | 19995 | 21029 | + | GT111 |
| CAZyme | HRGMv2_4096_26 | HRGMv2_4096_26_19 | 21040 | 23106 | + | GT111 | GT8 |
Gene ID: HRGMv2_4096_26_14
Type: CAZyme
Location: 15976 - 16899 (+)
Type: CAZyme
Location: 15976 - 16899 (+)
Gene ID: HRGMv2_4096_26_15
Type: CAZyme
Location: 16859 - 17788 (+)
Type: CAZyme
Location: 16859 - 17788 (+)
Gene ID: HRGMv2_4096_26_16
Type: TC
Location: 17819 - 19273 (+)
Type: TC
Location: 17819 - 19273 (+)
Gene ID: HRGMv2_4096_26_17
Type: TC
Location: 19286 - 20014 (+)
Type: TC
Location: 19286 - 20014 (+)
Gene ID: HRGMv2_4096_26_18
Type: CAZyme
Location: 19995 - 21029 (+)
Type: CAZyme
Location: 19995 - 21029 (+)
Gene ID: HRGMv2_4096_26_19
Type: CAZyme
Location: 21040 - 23106 (+)
Type: CAZyme
Location: 21040 - 23106 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Ventricola
Species
Ventricola intestinavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.