Cluster: HRGMv2_4096_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4096
- CGC Family ID: CGCFAM_00250
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4096_25 | HRGMv2_4096_25_2 | 425 | 2245 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_4096_25 | HRGMv2_4096_25_3 | 2258 | 4198 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_4096_25 | HRGMv2_4096_25_4 | 4277 | 5275 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4096_25 | HRGMv2_4096_25_5 | 5316 | 7637 | + | CE4 |
| CAZyme | HRGMv2_4096_25 | HRGMv2_4096_25_6 | 7696 | 9951 | + | CE4 |
| TC | HRGMv2_4096_25 | HRGMv2_4096_25_7 | 10190 | 11809 | + | 3.A.1.121.4 |
| TC | HRGMv2_4096_25 | HRGMv2_4096_25_8 | 11956 | 12510 | + | 4.F.1.1.7 |
Gene ID: HRGMv2_4096_25_2
Type: CAZyme
Location: 425 - 2245 (+)
Type: CAZyme
Location: 425 - 2245 (+)
Gene ID: HRGMv2_4096_25_3
Type:
Location: 2258 - 4198 (+)
Type:
Location: 2258 - 4198 (+)
Gene ID: HRGMv2_4096_25_4
Type:
Location: 4277 - 5275 (+)
Type:
Location: 4277 - 5275 (+)
Gene ID: HRGMv2_4096_25_5
Type: CAZyme
Location: 5316 - 7637 (+)
Type: CAZyme
Location: 5316 - 7637 (+)
Gene ID: HRGMv2_4096_25_6
Type: CAZyme
Location: 7696 - 9951 (+)
Type: CAZyme
Location: 7696 - 9951 (+)
Gene ID: HRGMv2_4096_25_7
Type: TC
Location: 10190 - 11809 (+)
Type: TC
Location: 10190 - 11809 (+)
Gene ID: HRGMv2_4096_25_8
Type: TC
Location: 11956 - 12510 (+)
Type: TC
Location: 11956 - 12510 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Ventricola
Species
Ventricola intestinavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.