dbCAN Logo

Cluster: HRGMv2_4096_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4096_24 HRGMv2_4096_24_1 3 1097 + 4.A.1.2.13
CAZyme HRGMv2_4096_24 HRGMv2_4096_24_2 1109 2746 + GH13_29
pfam HRGMv2_4096_24 HRGMv2_4096_24_3 3053 4075 - SpoIID
peptidase HRGMv2_4096_24 HRGMv2_4096_24_4 4123 4998 - M24.UPA
TC HRGMv2_4096_24 HRGMv2_4096_24_5 5031 5978 - 3.A.1.5.20
TC HRGMv2_4096_24 HRGMv2_4096_24_6 5997 7004 - 3.A.1.5.20
TC HRGMv2_4096_24 HRGMv2_4096_24_7 7041 7928 - 3.A.1.5.39
TC HRGMv2_4096_24 HRGMv2_4096_24_8 7946 8875 - 3.A.1.5.39
TC HRGMv2_4096_24 HRGMv2_4096_24_9 9112 10626 - 3.A.1.5.11
peptidase HRGMv2_4096_24 HRGMv2_4096_24_10 10709 11770 - M42.UPW
TC HRGMv2_4096_24 HRGMv2_4096_24_11 11998 12540 - 3.A.1.25.2
Gene ID: HRGMv2_4096_24_1
Type: TC
Location: 3 - 1097 (+)
Gene ID: HRGMv2_4096_24_2
Type: CAZyme
Location: 1109 - 2746 (+)
Gene ID: HRGMv2_4096_24_3
Type: pfam
Location: 3053 - 4075 (-)
Gene ID: HRGMv2_4096_24_4
Type: peptidase
Location: 4123 - 4998 (-)
Gene ID: HRGMv2_4096_24_5
Type: TC
Location: 5031 - 5978 (-)
Gene ID: HRGMv2_4096_24_6
Type: TC
Location: 5997 - 7004 (-)
Gene ID: HRGMv2_4096_24_7
Type: TC
Location: 7041 - 7928 (-)
Gene ID: HRGMv2_4096_24_8
Type: TC
Location: 7946 - 8875 (-)
Gene ID: HRGMv2_4096_24_9
Type: TC
Location: 9112 - 10626 (-)
Gene ID: HRGMv2_4096_24_10
Type: peptidase
Location: 10709 - 11770 (-)
Gene ID: HRGMv2_4096_24_11
Type: TC
Location: 11998 - 12540 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List