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Cluster: HRGMv2_4096_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4096_1 HRGMv2_4096_1_11 12706 15027 - 3.A.11.1.1
TC HRGMv2_4096_1 HRGMv2_4096_1_12 15108 16481 - 2.A.66.1.33
STP HRGMv2_4096_1 HRGMv2_4096_1_13 16686 17879 - Fer4
pfam HRGMv2_4096_1 HRGMv2_4096_1_14 17876 19069 - PS_pyruv_trans
CAZyme HRGMv2_4096_1 HRGMv2_4096_1_15 19066 20049 - GT2
CAZyme HRGMv2_4096_1 HRGMv2_4096_1_16 20067 20996 - GT2
CAZyme HRGMv2_4096_1 HRGMv2_4096_1_17 20993 22009 - GT2
CAZyme HRGMv2_4096_1 HRGMv2_4096_1_18 22006 23049 - GT2
TC HRGMv2_4096_1 HRGMv2_4096_1_19 23438 25336 - 9.B.18.2.1
Gene ID: HRGMv2_4096_1_11
Type: TC
Location: 12706 - 15027 (-)
Gene ID: HRGMv2_4096_1_12
Type: TC
Location: 15108 - 16481 (-)
Gene ID: HRGMv2_4096_1_13
Type: STP
Location: 16686 - 17879 (-)
Gene ID: HRGMv2_4096_1_14
Type: pfam
Location: 17876 - 19069 (-)
Gene ID: HRGMv2_4096_1_15
Type: CAZyme
Location: 19066 - 20049 (-)
Gene ID: HRGMv2_4096_1_16
Type: CAZyme
Location: 20067 - 20996 (-)
Gene ID: HRGMv2_4096_1_17
Type: CAZyme
Location: 20993 - 22009 (-)
Gene ID: HRGMv2_4096_1_18
Type: CAZyme
Location: 22006 - 23049 (-)
Gene ID: HRGMv2_4096_1_19
Type: TC
Location: 23438 - 25336 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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