Cluster: HRGMv2_4066_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4066
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4066_17 | HRGMv2_4066_17_13 | 16425 | 18608 | + | GH36 |
| pfam | HRGMv2_4066_17 | HRGMv2_4066_17_14 | 18772 | 19323 | + | LRR_5 |
| STP | HRGMv2_4066_17 | HRGMv2_4066_17_15 | 19618 | 20466 | + | SBP_bac_3 | SBP_bac_3 |
| TC | HRGMv2_4066_17 | HRGMv2_4066_17_16 | 20470 | 21156 | + | 3.A.1.3.14 |
| TC | HRGMv2_4066_17 | HRGMv2_4066_17_17 | 21159 | 21938 | + | 3.A.1.3.23 |
Gene ID: HRGMv2_4066_17_13
Type: CAZyme
Location: 16425 - 18608 (+)
Type: CAZyme
Location: 16425 - 18608 (+)
Gene ID: HRGMv2_4066_17_14
Type: pfam
Location: 18772 - 19323 (+)
Type: pfam
Location: 18772 - 19323 (+)
Gene ID: HRGMv2_4066_17_15
Type: STP
Location: 19618 - 20466 (+)
Type: STP
Location: 19618 - 20466 (+)
Gene ID: HRGMv2_4066_17_16
Type: TC
Location: 20470 - 21156 (+)
Type: TC
Location: 20470 - 21156 (+)
Gene ID: HRGMv2_4066_17_17
Type: TC
Location: 21159 - 21938 (+)
Type: TC
Location: 21159 - 21938 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
UBA4675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.