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Cluster: HRGMv2_4063_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4063_18 HRGMv2_4063_18_10 12508 13884 - 2.A.66.1.32
TF HRGMv2_4063_18 HRGMv2_4063_18_11 13871 14326 - MarR
CAZyme HRGMv2_4063_18 HRGMv2_4063_18_12 14522 16468 - CE2
pfam HRGMv2_4063_18 HRGMv2_4063_18_13 16465 17481 - SASA
NULL(UNKNOWN) HRGMv2_4063_18 HRGMv2_4063_18_14 17494 19587 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4063_18 HRGMv2_4063_18_15 19622 20581 - GT108
TF HRGMv2_4063_18 HRGMv2_4063_18_16 20574 21485 - HTH_AraC
NULL(UNKNOWN) HRGMv2_4063_18 HRGMv2_4063_18_17 21482 23236 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4063_18 HRGMv2_4063_18_18 23233 25755 - CBM32 | GH130
Gene ID: HRGMv2_4063_18_10
Type: TC
Location: 12508 - 13884 (-)
Gene ID: HRGMv2_4063_18_11
Type: TF
Location: 13871 - 14326 (-)
Gene ID: HRGMv2_4063_18_12
Type: CAZyme
Location: 14522 - 16468 (-)
Gene ID: HRGMv2_4063_18_13
Type: pfam
Location: 16465 - 17481 (-)
Gene ID: HRGMv2_4063_18_14
Type:
Location: 17494 - 19587 (-)
Gene ID: HRGMv2_4063_18_15
Type: CAZyme
Location: 19622 - 20581 (-)
Gene ID: HRGMv2_4063_18_16
Type: TF
Location: 20574 - 21485 (-)
Gene ID: HRGMv2_4063_18_17
Type:
Location: 21482 - 23236 (-)
Gene ID: HRGMv2_4063_18_18
Type: CAZyme
Location: 23233 - 25755 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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