Cluster: HRGMv2_4063_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4063
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4063_15 | HRGMv2_4063_15_43 | 28779 | 29957 | + | 2.A.119.1.3 |
| pfam | HRGMv2_4063_15 | HRGMv2_4063_15_44 | 29977 | 30216 | + | Thioredoxin_3 |
| pfam | HRGMv2_4063_15 | HRGMv2_4063_15_45 | 31128 | 32144 | + | ADH_zinc_N | ADH_N |
| CAZyme | HRGMv2_4063_15 | HRGMv2_4063_15_46 | 32332 | 34251 | + | CBM48 | GH13_9 |
Gene ID: HRGMv2_4063_15_43
Type: TC
Location: 28779 - 29957 (+)
Type: TC
Location: 28779 - 29957 (+)
Gene ID: HRGMv2_4063_15_44
Type: pfam
Location: 29977 - 30216 (+)
Type: pfam
Location: 29977 - 30216 (+)
Gene ID: HRGMv2_4063_15_45
Type: pfam
Location: 31128 - 32144 (+)
Type: pfam
Location: 31128 - 32144 (+)
Gene ID: HRGMv2_4063_15_46
Type: CAZyme
Location: 32332 - 34251 (+)
Type: CAZyme
Location: 32332 - 34251 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
HGM11386
Species
HGM11386 sp949294845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.