Cluster: HRGMv2_4063_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4063
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4063_11 | HRGMv2_4063_11_14 | 11604 | 13226 | - | GH123 |
| pfam | HRGMv2_4063_11 | HRGMv2_4063_11_15 | 13251 | 14705 | - | Fer2 | RACo_C_ter | Raco_middle |
| pfam | HRGMv2_4063_11 | HRGMv2_4063_11_16 | 15000 | 15428 | - | HSP20 |
| TC | HRGMv2_4063_11 | HRGMv2_4063_11_17 | 15679 | 16605 | - | 2.A.115.2.14 |
| TC | HRGMv2_4063_11 | HRGMv2_4063_11_18 | 16626 | 17483 | - | 2.A.66.1.13 |
Gene ID: HRGMv2_4063_11_14
Type: CAZyme
Location: 11604 - 13226 (-)
Type: CAZyme
Location: 11604 - 13226 (-)
Gene ID: HRGMv2_4063_11_15
Type: pfam
Location: 13251 - 14705 (-)
Type: pfam
Location: 13251 - 14705 (-)
Gene ID: HRGMv2_4063_11_16
Type: pfam
Location: 15000 - 15428 (-)
Type: pfam
Location: 15000 - 15428 (-)
Gene ID: HRGMv2_4063_11_17
Type: TC
Location: 15679 - 16605 (-)
Type: TC
Location: 15679 - 16605 (-)
Gene ID: HRGMv2_4063_11_18
Type: TC
Location: 16626 - 17483 (-)
Type: TC
Location: 16626 - 17483 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
HGM11386
Species
HGM11386 sp949294845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.