Cluster: HRGMv2_4063_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4063
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4063_9 | HRGMv2_4063_9_30 | 39305 | 40123 | - | 3.A.1.132.3 |
| NULL(UNKNOWN) | HRGMv2_4063_9 | HRGMv2_4063_9_31 | 40238 | 40741 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4063_9 | HRGMv2_4063_9_32 | 41019 | 42851 | - | GH20 |
| CAZyme | HRGMv2_4063_9 | HRGMv2_4063_9_33 | 42962 | 45823 | - | GH2 |
| CAZyme | HRGMv2_4063_9 | HRGMv2_4063_9_34 | 45943 | 46446 | - | GH23 |
Gene ID: HRGMv2_4063_9_30
Type: TC
Location: 39305 - 40123 (-)
Type: TC
Location: 39305 - 40123 (-)
Gene ID: HRGMv2_4063_9_31
Type:
Location: 40238 - 40741 (-)
Type:
Location: 40238 - 40741 (-)
Gene ID: HRGMv2_4063_9_32
Type: CAZyme
Location: 41019 - 42851 (-)
Type: CAZyme
Location: 41019 - 42851 (-)
Gene ID: HRGMv2_4063_9_33
Type: CAZyme
Location: 42962 - 45823 (-)
Type: CAZyme
Location: 42962 - 45823 (-)
Gene ID: HRGMv2_4063_9_34
Type: CAZyme
Location: 45943 - 46446 (-)
Type: CAZyme
Location: 45943 - 46446 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
HGM11386
Species
HGM11386 sp949294845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.