Cluster: HRGMv2_4063_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4063
- CGC Family ID: CGCFAM_00906
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4063_5 | HRGMv2_4063_5_41 | 26103 | 27725 | + | 4.C.1.1.16 |
| TF | HRGMv2_4063_5 | HRGMv2_4063_5_42 | 27715 | 28470 | + | HTH_AraC |
| pfam | HRGMv2_4063_5 | HRGMv2_4063_5_43 | 28567 | 29400 | + | AP_endonuc_2 |
| CAZyme | HRGMv2_4063_5 | HRGMv2_4063_5_44 | 29439 | 30500 | + | GH179 |
Gene ID: HRGMv2_4063_5_41
Type: TC
Location: 26103 - 27725 (+)
Type: TC
Location: 26103 - 27725 (+)
Gene ID: HRGMv2_4063_5_42
Type: TF
Location: 27715 - 28470 (+)
Type: TF
Location: 27715 - 28470 (+)
Gene ID: HRGMv2_4063_5_43
Type: pfam
Location: 28567 - 29400 (+)
Type: pfam
Location: 28567 - 29400 (+)
Gene ID: HRGMv2_4063_5_44
Type: CAZyme
Location: 29439 - 30500 (+)
Type: CAZyme
Location: 29439 - 30500 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
HGM11386
Species
HGM11386 sp949294845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.