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Cluster: HRGMv2_4063_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4063_3 HRGMv2_4063_3_61 62008 63903 - 3.A.1.135.5
TC HRGMv2_4063_3 HRGMv2_4063_3_62 63896 65662 - 3.A.1.135.5
peptidase HRGMv2_4063_3 HRGMv2_4063_3_63 65853 66671 + G05.UPW
CAZyme HRGMv2_4063_3 HRGMv2_4063_3_64 66855 68669 + GH146
pfam HRGMv2_4063_3 HRGMv2_4063_3_65 68845 69900 - APH
TF HRGMv2_4063_3 HRGMv2_4063_3_66 69953 70798 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_4063_3 HRGMv2_4063_3_67 70795 72012 - GH109
NULL(UNKNOWN) HRGMv2_4063_3 HRGMv2_4063_3_68 72120 72623 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4063_3 HRGMv2_4063_3_69 72620 73447 - 1.A.23.2.2
TC HRGMv2_4063_3 HRGMv2_4063_3_70 73464 74381 - 8.A.5.1.6
CAZyme HRGMv2_4063_3 HRGMv2_4063_3_71 74539 76695 + GH36
Gene ID: HRGMv2_4063_3_61
Type: TC
Location: 62008 - 63903 (-)
Gene ID: HRGMv2_4063_3_62
Type: TC
Location: 63896 - 65662 (-)
Gene ID: HRGMv2_4063_3_63
Type: peptidase
Location: 65853 - 66671 (+)
Gene ID: HRGMv2_4063_3_64
Type: CAZyme
Location: 66855 - 68669 (+)
Gene ID: HRGMv2_4063_3_65
Type: pfam
Location: 68845 - 69900 (-)
Gene ID: HRGMv2_4063_3_66
Type: TF
Location: 69953 - 70798 (+)
Gene ID: HRGMv2_4063_3_67
Type: CAZyme
Location: 70795 - 72012 (-)
Gene ID: HRGMv2_4063_3_68
Type:
Location: 72120 - 72623 (-)
Gene ID: HRGMv2_4063_3_69
Type: TC
Location: 72620 - 73447 (-)
Gene ID: HRGMv2_4063_3_70
Type: TC
Location: 73464 - 74381 (-)
Gene ID: HRGMv2_4063_3_71
Type: CAZyme
Location: 74539 - 76695 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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