Cluster: HRGMv2_4063_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4063
- CGC Family ID: CGCFAM_01636
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4063_2 | HRGMv2_4063_2_69 | 72703 | 73701 | + | 2.A.20.1.5 |
| NULL(UNKNOWN) | HRGMv2_4063_2 | HRGMv2_4063_2_70 | 73703 | 74293 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4063_2 | HRGMv2_4063_2_71 | 74360 | 76282 | + | CBM67 | GH78 |
| TF | HRGMv2_4063_2 | HRGMv2_4063_2_72 | 76752 | 77213 | + | MarR |
| TC | HRGMv2_4063_2 | HRGMv2_4063_2_73 | 77210 | 78931 | + | 3.A.1.135.5 |
| TC | HRGMv2_4063_2 | HRGMv2_4063_2_74 | 78921 | 80687 | + | 3.A.1.135.5 |
Gene ID: HRGMv2_4063_2_69
Type: TC
Location: 72703 - 73701 (+)
Type: TC
Location: 72703 - 73701 (+)
Gene ID: HRGMv2_4063_2_70
Type:
Location: 73703 - 74293 (+)
Type:
Location: 73703 - 74293 (+)
Gene ID: HRGMv2_4063_2_71
Type: CAZyme
Location: 74360 - 76282 (+)
Type: CAZyme
Location: 74360 - 76282 (+)
Gene ID: HRGMv2_4063_2_72
Type: TF
Location: 76752 - 77213 (+)
Type: TF
Location: 76752 - 77213 (+)
Gene ID: HRGMv2_4063_2_73
Type: TC
Location: 77210 - 78931 (+)
Type: TC
Location: 77210 - 78931 (+)
Gene ID: HRGMv2_4063_2_74
Type: TC
Location: 78921 - 80687 (+)
Type: TC
Location: 78921 - 80687 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
HGM11386
Species
HGM11386 sp949294845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.