Cluster: HRGMv2_4063_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4063
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4063_54 | HRGMv2_4063_54_4 | 4536 | 5645 | + | 2.A.4.7.2 |
| TC | HRGMv2_4063_54 | HRGMv2_4063_54_5 | 5760 | 7415 | + | 2.A.21.2.2 |
| NULL(UNKNOWN) | HRGMv2_4063_54 | HRGMv2_4063_54_6 | 7645 | 10731 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_4063_54 | HRGMv2_4063_54_7 | 10913 | 11758 | + | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_4063_54 | HRGMv2_4063_54_8 | 11755 | 13077 | + | GH4 |
Gene ID: HRGMv2_4063_54_4
Type: TC
Location: 4536 - 5645 (+)
Type: TC
Location: 4536 - 5645 (+)
Gene ID: HRGMv2_4063_54_5
Type: TC
Location: 5760 - 7415 (+)
Type: TC
Location: 5760 - 7415 (+)
Gene ID: HRGMv2_4063_54_6
Type:
Location: 7645 - 10731 (+)
Type:
Location: 7645 - 10731 (+)
Gene ID: HRGMv2_4063_54_7
Type: TF
Location: 10913 - 11758 (+)
Type: TF
Location: 10913 - 11758 (+)
Gene ID: HRGMv2_4063_54_8
Type: CAZyme
Location: 11755 - 13077 (+)
Type: CAZyme
Location: 11755 - 13077 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
HGM11386
Species
HGM11386 sp949294845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.