Cluster: HRGMv2_4063_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4063
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4063_43 | HRGMv2_4063_43_3 | 7272 | 9065 | - | GH43_33 |
| TC | HRGMv2_4063_43 | HRGMv2_4063_43_4 | 9115 | 10008 | - | 3.A.1.1.34 |
| TC | HRGMv2_4063_43 | HRGMv2_4063_43_5 | 10001 | 10942 | - | 3.A.1.1.22 |
| STP | HRGMv2_4063_43 | HRGMv2_4063_43_6 | 10958 | 12730 | - | SBP_bac_1 |
| CAZyme | HRGMv2_4063_43 | HRGMv2_4063_43_7 | 12718 | 14751 | - | GH3 |
Gene ID: HRGMv2_4063_43_3
Type: CAZyme
Location: 7272 - 9065 (-)
Type: CAZyme
Location: 7272 - 9065 (-)
Gene ID: HRGMv2_4063_43_4
Type: TC
Location: 9115 - 10008 (-)
Type: TC
Location: 9115 - 10008 (-)
Gene ID: HRGMv2_4063_43_5
Type: TC
Location: 10001 - 10942 (-)
Type: TC
Location: 10001 - 10942 (-)
Gene ID: HRGMv2_4063_43_6
Type: STP
Location: 10958 - 12730 (-)
Type: STP
Location: 10958 - 12730 (-)
Gene ID: HRGMv2_4063_43_7
Type: CAZyme
Location: 12718 - 14751 (-)
Type: CAZyme
Location: 12718 - 14751 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
HGM11386
Species
HGM11386 sp949294845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.