Cluster: HRGMv2_4063_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4063
- CGC Family ID: CGCFAM_00026
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4063_41 | HRGMv2_4063_41_5 | 9061 | 10545 | - | 1.I.1.1.3 |
| STP | HRGMv2_4063_41 | HRGMv2_4063_41_6 | 10562 | 12298 | - | SBP_bac_1 |
| TC | HRGMv2_4063_41 | HRGMv2_4063_41_7 | 12314 | 13225 | - | 3.A.1.1.29 |
| TC | HRGMv2_4063_41 | HRGMv2_4063_41_8 | 13234 | 14160 | - | 3.A.1.1.10 |
| CAZyme | HRGMv2_4063_41 | HRGMv2_4063_41_9 | 14157 | 15206 | - | GH130_4 |
| CAZyme | HRGMv2_4063_41 | HRGMv2_4063_41_10 | 15562 | 17364 | - | GH36 |
Gene ID: HRGMv2_4063_41_5
Type: TC
Location: 9061 - 10545 (-)
Type: TC
Location: 9061 - 10545 (-)
Gene ID: HRGMv2_4063_41_6
Type: STP
Location: 10562 - 12298 (-)
Type: STP
Location: 10562 - 12298 (-)
Gene ID: HRGMv2_4063_41_7
Type: TC
Location: 12314 - 13225 (-)
Type: TC
Location: 12314 - 13225 (-)
Gene ID: HRGMv2_4063_41_8
Type: TC
Location: 13234 - 14160 (-)
Type: TC
Location: 13234 - 14160 (-)
Gene ID: HRGMv2_4063_41_9
Type: CAZyme
Location: 14157 - 15206 (-)
Type: CAZyme
Location: 14157 - 15206 (-)
Gene ID: HRGMv2_4063_41_10
Type: CAZyme
Location: 15562 - 17364 (-)
Type: CAZyme
Location: 15562 - 17364 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
HGM11386
Species
HGM11386 sp949294845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.