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Cluster: HRGMv2_4063_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4063_31 HRGMv2_4063_31_4 8585 9088 - 9.B.156.3.1
TC HRGMv2_4063_31 HRGMv2_4063_31_5 9085 9729 - 9.B.156.3.1
CAZyme HRGMv2_4063_31 HRGMv2_4063_31_6 9965 10912 - GH43_32
TF HRGMv2_4063_31 HRGMv2_4063_31_7 10954 11934 - LacI
TC HRGMv2_4063_31 HRGMv2_4063_31_8 11931 13721 - 3.A.1.1.26
TC HRGMv2_4063_31 HRGMv2_4063_31_9 13746 14666 - 3.A.1.1.36
TC HRGMv2_4063_31 HRGMv2_4063_31_10 14656 15699 - 3.A.1.1.20
STP HRGMv2_4063_31 HRGMv2_4063_31_11 15709 17157 - SBP_bac_1
CAZyme HRGMv2_4063_31 HRGMv2_4063_31_12 17185 19182 - GH97
Gene ID: HRGMv2_4063_31_4
Type: TC
Location: 8585 - 9088 (-)
Gene ID: HRGMv2_4063_31_5
Type: TC
Location: 9085 - 9729 (-)
Gene ID: HRGMv2_4063_31_6
Type: CAZyme
Location: 9965 - 10912 (-)
Gene ID: HRGMv2_4063_31_7
Type: TF
Location: 10954 - 11934 (-)
Gene ID: HRGMv2_4063_31_8
Type: TC
Location: 11931 - 13721 (-)
Gene ID: HRGMv2_4063_31_9
Type: TC
Location: 13746 - 14666 (-)
Gene ID: HRGMv2_4063_31_10
Type: TC
Location: 14656 - 15699 (-)
Gene ID: HRGMv2_4063_31_11
Type: STP
Location: 15709 - 17157 (-)
Gene ID: HRGMv2_4063_31_12
Type: CAZyme
Location: 17185 - 19182 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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