Cluster: HRGMv2_4063_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4063
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4063_20 | HRGMv2_4063_20_3 | 3213 | 4070 | + | 3.A.1.1.9 |
| STP | HRGMv2_4063_20 | HRGMv2_4063_20_4 | 4085 | 5674 | + | SBP_bac_1 |
| CAZyme | HRGMv2_4063_20 | HRGMv2_4063_20_5 | 5680 | 7215 | + | GH31_19 |
| CAZyme | HRGMv2_4063_20 | HRGMv2_4063_20_6 | 7226 | 9478 | + | GH78 |
| NULL(UNKNOWN) | HRGMv2_4063_20 | HRGMv2_4063_20_7 | 9528 | 10277 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4063_20 | HRGMv2_4063_20_8 | 10461 | 12329 | - | 3.A.1.122.13 |
Gene ID: HRGMv2_4063_20_3
Type: TC
Location: 3213 - 4070 (+)
Type: TC
Location: 3213 - 4070 (+)
Gene ID: HRGMv2_4063_20_4
Type: STP
Location: 4085 - 5674 (+)
Type: STP
Location: 4085 - 5674 (+)
Gene ID: HRGMv2_4063_20_5
Type: CAZyme
Location: 5680 - 7215 (+)
Type: CAZyme
Location: 5680 - 7215 (+)
Gene ID: HRGMv2_4063_20_6
Type: CAZyme
Location: 7226 - 9478 (+)
Type: CAZyme
Location: 7226 - 9478 (+)
Gene ID: HRGMv2_4063_20_7
Type:
Location: 9528 - 10277 (-)
Type:
Location: 9528 - 10277 (-)
Gene ID: HRGMv2_4063_20_8
Type: TC
Location: 10461 - 12329 (-)
Type: TC
Location: 10461 - 12329 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
HGM11386
Species
HGM11386 sp949294845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.