Cluster: HRGMv2_4062_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4062
- CGC Family ID: CGCFAM_03185
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4062_3 | HRGMv2_4062_3_20 | 27234 | 28097 | - | 3.A.1.1.34 |
| TC | HRGMv2_4062_3 | HRGMv2_4062_3_21 | 28100 | 28972 | - | 3.A.1.1.20 |
| STP | HRGMv2_4062_3 | HRGMv2_4062_3_22 | 28982 | 30589 | - | SBP_bac_1 |
| CAZyme | HRGMv2_4062_3 | HRGMv2_4062_3_23 | 30601 | 32319 | - | GH2 |
| CAZyme | HRGMv2_4062_3 | HRGMv2_4062_3_24 | 32549 | 34600 | - | GH35 |
| CAZyme | HRGMv2_4062_3 | HRGMv2_4062_3_25 | 34609 | 36705 | - | GH36 |
Gene ID: HRGMv2_4062_3_20
Type: TC
Location: 27234 - 28097 (-)
Type: TC
Location: 27234 - 28097 (-)
Gene ID: HRGMv2_4062_3_21
Type: TC
Location: 28100 - 28972 (-)
Type: TC
Location: 28100 - 28972 (-)
Gene ID: HRGMv2_4062_3_22
Type: STP
Location: 28982 - 30589 (-)
Type: STP
Location: 28982 - 30589 (-)
Gene ID: HRGMv2_4062_3_23
Type: CAZyme
Location: 30601 - 32319 (-)
Type: CAZyme
Location: 30601 - 32319 (-)
Gene ID: HRGMv2_4062_3_24
Type: CAZyme
Location: 32549 - 34600 (-)
Type: CAZyme
Location: 32549 - 34600 (-)
Gene ID: HRGMv2_4062_3_25
Type: CAZyme
Location: 34609 - 36705 (-)
Type: CAZyme
Location: 34609 - 36705 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
UBA1259
Species
UBA1259 sp016295005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.