Cluster: HRGMv2_4062_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4062
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4062_3 | HRGMv2_4062_3_13 | 16832 | 17740 | - | 3.A.1.105.9 |
| NULL(UNKNOWN) | HRGMv2_4062_3 | HRGMv2_4062_3_14 | 17877 | 18377 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_4062_3 | HRGMv2_4062_3_15 | 18838 | 19788 | + | HTH_5 |
| CAZyme | HRGMv2_4062_3 | HRGMv2_4062_3_16 | 20064 | 22565 | - | CBM66 | GH43 |
Gene ID: HRGMv2_4062_3_13
Type: TC
Location: 16832 - 17740 (-)
Type: TC
Location: 16832 - 17740 (-)
Gene ID: HRGMv2_4062_3_14
Type:
Location: 17877 - 18377 (-)
Type:
Location: 17877 - 18377 (-)
Gene ID: HRGMv2_4062_3_15
Type: TF
Location: 18838 - 19788 (+)
Type: TF
Location: 18838 - 19788 (+)
Gene ID: HRGMv2_4062_3_16
Type: CAZyme
Location: 20064 - 22565 (-)
Type: CAZyme
Location: 20064 - 22565 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
UBA1259
Species
UBA1259 sp016295005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.