Cluster: HRGMv2_4062_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4062
- CGC Family ID: CGCFAM_00232
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4062_33 | HRGMv2_4062_33_3 | 1085 | 2680 | - | GH33 |
| CAZyme | HRGMv2_4062_33 | HRGMv2_4062_33_4 | 2705 | 3991 | - | GH33 |
| NULL(UNKNOWN) | HRGMv2_4062_33 | HRGMv2_4062_33_5 | 4070 | 6952 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_4062_33 | HRGMv2_4062_33_6 | 7006 | 8877 | - | SBP_bac_1 |
| TC | HRGMv2_4062_33 | HRGMv2_4062_33_7 | 8908 | 9810 | - | 3.A.1.1.29 |
| TC | HRGMv2_4062_33 | HRGMv2_4062_33_8 | 9810 | 10799 | - | 3.A.1.1.29 |
Gene ID: HRGMv2_4062_33_3
Type: CAZyme
Location: 1085 - 2680 (-)
Type: CAZyme
Location: 1085 - 2680 (-)
Gene ID: HRGMv2_4062_33_4
Type: CAZyme
Location: 2705 - 3991 (-)
Type: CAZyme
Location: 2705 - 3991 (-)
Gene ID: HRGMv2_4062_33_5
Type:
Location: 4070 - 6952 (-)
Type:
Location: 4070 - 6952 (-)
Gene ID: HRGMv2_4062_33_6
Type: STP
Location: 7006 - 8877 (-)
Type: STP
Location: 7006 - 8877 (-)
Gene ID: HRGMv2_4062_33_7
Type: TC
Location: 8908 - 9810 (-)
Type: TC
Location: 8908 - 9810 (-)
Gene ID: HRGMv2_4062_33_8
Type: TC
Location: 9810 - 10799 (-)
Type: TC
Location: 9810 - 10799 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
UBA1259
Species
UBA1259 sp016295005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.