Cluster: HRGMv2_4062_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4062
- CGC Family ID: CGCFAM_02160
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4062_19 | HRGMv2_4062_19_16 | 20871 | 21761 | + | 3.A.1.1.20 |
| TC | HRGMv2_4062_19 | HRGMv2_4062_19_17 | 21767 | 22645 | + | 3.A.1.1.46 |
| pfam | HRGMv2_4062_19 | HRGMv2_4062_19_18 | 22734 | 26504 | + | CarboxypepD_reg | CarbopepD_reg_2 |
| CAZyme | HRGMv2_4062_19 | HRGMv2_4062_19_19 | 26531 | 29023 | + | CBM66 | GH43_32 |
| CAZyme | HRGMv2_4062_19 | HRGMv2_4062_19_20 | 29150 | 31525 | + | GH43_32 |
| CAZyme | HRGMv2_4062_19 | HRGMv2_4062_19_21 | 31606 | 33342 | + | GH2 |
Gene ID: HRGMv2_4062_19_16
Type: TC
Location: 20871 - 21761 (+)
Type: TC
Location: 20871 - 21761 (+)
Gene ID: HRGMv2_4062_19_17
Type: TC
Location: 21767 - 22645 (+)
Type: TC
Location: 21767 - 22645 (+)
Gene ID: HRGMv2_4062_19_18
Type: pfam
Location: 22734 - 26504 (+)
Type: pfam
Location: 22734 - 26504 (+)
Gene ID: HRGMv2_4062_19_19
Type: CAZyme
Location: 26531 - 29023 (+)
Type: CAZyme
Location: 26531 - 29023 (+)
Gene ID: HRGMv2_4062_19_20
Type: CAZyme
Location: 29150 - 31525 (+)
Type: CAZyme
Location: 29150 - 31525 (+)
Gene ID: HRGMv2_4062_19_21
Type: CAZyme
Location: 31606 - 33342 (+)
Type: CAZyme
Location: 31606 - 33342 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
UBA1259
Species
UBA1259 sp016295005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.