Cluster: HRGMv2_4061_CGC25
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4061
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4061_88 | HRGMv2_4061_88_1 | 2 | 817 | + | 9.B.18.1.2 |
| pfam | HRGMv2_4061_88 | HRGMv2_4061_88_2 | 818 | 1744 | + | Aminotran_4 |
| CAZyme | HRGMv2_4061_88 | HRGMv2_4061_88_3 | 1753 | 2610 | + | GT2 |
| pfam | HRGMv2_4061_88 | HRGMv2_4061_88_4 | 2612 | 3436 | + | LicD |
| CAZyme | HRGMv2_4061_88 | HRGMv2_4061_88_5 | 3451 | 4371 | + | GT2 |
Gene ID: HRGMv2_4061_88_1
Type: TC
Location: 2 - 817 (+)
Type: TC
Location: 2 - 817 (+)
Gene ID: HRGMv2_4061_88_2
Type: pfam
Location: 818 - 1744 (+)
Type: pfam
Location: 818 - 1744 (+)
Gene ID: HRGMv2_4061_88_3
Type: CAZyme
Location: 1753 - 2610 (+)
Type: CAZyme
Location: 1753 - 2610 (+)
Gene ID: HRGMv2_4061_88_4
Type: pfam
Location: 2612 - 3436 (+)
Type: pfam
Location: 2612 - 3436 (+)
Gene ID: HRGMv2_4061_88_5
Type: CAZyme
Location: 3451 - 4371 (+)
Type: CAZyme
Location: 3451 - 4371 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
UBA10677
Species
UBA10677 sp934277845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.