Cluster: HRGMv2_4061_CGC20

🧬 Cluster Details

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_4061_58	HRGMv2_4061_58_7	8150	9460	+	3.D.6.1.2
TC	HRGMv2_4061_58	HRGMv2_4061_58_8	9453	10541	+	3.D.6.1.2
NULL(UNKNOWN)	HRGMv2_4061_58	HRGMv2_4061_58_9	10543	11181	+	NULL(UNKNOWN) [View Structural Homologs]
TC	HRGMv2_4061_58	HRGMv2_4061_58_10	11178	11783	+	3.D.6.1.2
TC	HRGMv2_4061_58	HRGMv2_4061_58_11	11783	12367	+	3.D.6.1.2
TC	HRGMv2_4061_58	HRGMv2_4061_58_12	12379	13260	+	3.D.6.1.3
CAZyme	HRGMv2_4061_58	HRGMv2_4061_58_13	13467	14060	+	CE4

Gene ID: HRGMv2_4061_58_7
Type: TC
Location: 8150 - 9460 (+)

Gene ID: HRGMv2_4061_58_8
Type: TC
Location: 9453 - 10541 (+)

Gene ID: HRGMv2_4061_58_9
Type:
Location: 10543 - 11181 (+)

Gene ID: HRGMv2_4061_58_10
Type: TC
Location: 11178 - 11783 (+)

Gene ID: HRGMv2_4061_58_11
Type: TC
Location: 11783 - 12367 (+)

Gene ID: HRGMv2_4061_58_12
Type: TC
Location: 12379 - 13260 (+)

Gene ID: HRGMv2_4061_58_13
Type: CAZyme
Location: 13467 - 14060 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_4061_58_8	vegetarian > omnivore	2.87427	0.02517
HRGMv2_4061_58_8	vegetarian > vegan	2.28477	0.00565
HRGMv2_4061_58_13	vegetarian > omnivore	1.90930	0.02517