Cluster: HRGMv2_4061_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4061
- CGC Family ID: CGCFAM_01004
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4061_51 | HRGMv2_4061_51_8 | 7932 | 8837 | - | 3.A.1.1.29 |
| TC | HRGMv2_4061_51 | HRGMv2_4061_51_9 | 8847 | 9806 | - | 3.A.1.1.10 |
| CAZyme | HRGMv2_4061_51 | HRGMv2_4061_51_10 | 9979 | 10812 | + | CE4 |
| CAZyme | HRGMv2_4061_51 | HRGMv2_4061_51_11 | 10794 | 12158 | - | GH1 |
| CAZyme | HRGMv2_4061_51 | HRGMv2_4061_51_12 | 12332 | 14767 | + | GH94 |
Gene ID: HRGMv2_4061_51_8
Type: TC
Location: 7932 - 8837 (-)
Type: TC
Location: 7932 - 8837 (-)
Gene ID: HRGMv2_4061_51_9
Type: TC
Location: 8847 - 9806 (-)
Type: TC
Location: 8847 - 9806 (-)
Gene ID: HRGMv2_4061_51_10
Type: CAZyme
Location: 9979 - 10812 (+)
Type: CAZyme
Location: 9979 - 10812 (+)
Gene ID: HRGMv2_4061_51_11
Type: CAZyme
Location: 10794 - 12158 (-)
Type: CAZyme
Location: 10794 - 12158 (-)
Gene ID: HRGMv2_4061_51_12
Type: CAZyme
Location: 12332 - 14767 (+)
Type: CAZyme
Location: 12332 - 14767 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
UBA10677
Species
UBA10677 sp934277845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.