Cluster: HRGMv2_4061_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4061
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4061_27 | HRGMv2_4061_27_7 | 7657 | 8616 | + | GH43_26 |
| pfam | HRGMv2_4061_27 | HRGMv2_4061_27_8 | 8672 | 9091 | + | MGS |
| TC | HRGMv2_4061_27 | HRGMv2_4061_27_9 | 9773 | 11587 | - | 3.A.1.135.9 |
| TC | HRGMv2_4061_27 | HRGMv2_4061_27_10 | 11584 | 13314 | - | 3.A.1.135.9 |
Gene ID: HRGMv2_4061_27_7
Type: CAZyme
Location: 7657 - 8616 (+)
Type: CAZyme
Location: 7657 - 8616 (+)
Gene ID: HRGMv2_4061_27_8
Type: pfam
Location: 8672 - 9091 (+)
Type: pfam
Location: 8672 - 9091 (+)
Gene ID: HRGMv2_4061_27_9
Type: TC
Location: 9773 - 11587 (-)
Type: TC
Location: 9773 - 11587 (-)
Gene ID: HRGMv2_4061_27_10
Type: TC
Location: 11584 - 13314 (-)
Type: TC
Location: 11584 - 13314 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
UBA10677
Species
UBA10677 sp934277845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4061_27_7 | vegetarian > omnivore | 1.74759 | 0.02517 |
| HRGMv2_4061_27_7 | vegetarian > vegan | 2.83416 | 0.00565 |