Cluster: HRGMv2_4060_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: HRGMv2_4060
- CGC Family ID: CGCFAM_00215
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4060_66 | HRGMv2_4060_66_3 | 1939 | 3294 | + | 3.A.1.1.27 |
| TC | HRGMv2_4060_66 | HRGMv2_4060_66_4 | 3294 | 4151 | + | 3.A.1.1.27 |
| CAZyme | HRGMv2_4060_66 | HRGMv2_4060_66_5 | 4154 | 6403 | + | GT35 |
| CAZyme | HRGMv2_4060_66 | HRGMv2_4060_66_6 | 6457 | 7965 | + | GH77 |
Gene ID: HRGMv2_4060_66_3
Type: TC
Location: 1939 - 3294 (+)
Type: TC
Location: 1939 - 3294 (+)
Gene ID: HRGMv2_4060_66_4
Type: TC
Location: 3294 - 4151 (+)
Type: TC
Location: 3294 - 4151 (+)
Gene ID: HRGMv2_4060_66_5
Type: CAZyme
Location: 4154 - 6403 (+)
Type: CAZyme
Location: 4154 - 6403 (+)
Gene ID: HRGMv2_4060_66_6
Type: CAZyme
Location: 6457 - 7965 (+)
Type: CAZyme
Location: 6457 - 7965 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
UMGS775
Species
UMGS775 sp944372565
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4060_66_6 | vegetarian > vegan | 1.65436 | 0.03116 |