dbCAN Logo

Cluster: HRGMv2_4059_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4059_7 HRGMv2_4059_7_36 46404 47336 + 3.A.1.34.1
TC HRGMv2_4059_7 HRGMv2_4059_7_37 47329 48102 + 3.A.1.34.1
pfam HRGMv2_4059_7 HRGMv2_4059_7_38 48323 49285 - ROK
pfam HRGMv2_4059_7 HRGMv2_4059_7_39 49342 50280 - PMI_typeI_cat
TC HRGMv2_4059_7 HRGMv2_4059_7_40 50460 51740 + 2.A.49.9.3
pfam HRGMv2_4059_7 HRGMv2_4059_7_41 51776 53179 + ATP_bind_3 | TilS_C
STP HRGMv2_4059_7 HRGMv2_4059_7_42 53181 53720 + Pribosyltran
TC HRGMv2_4059_7 HRGMv2_4059_7_43 53829 54599 - 3.A.1.103.1
TC HRGMv2_4059_7 HRGMv2_4059_7_44 54607 55410 - 3.A.1.103.4
CAZyme HRGMv2_4059_7 HRGMv2_4059_7_45 55474 56610 - GT4
TC HRGMv2_4059_7 HRGMv2_4059_7_46 56617 57306 - 9.B.18.1.2
Gene ID: HRGMv2_4059_7_36
Type: TC
Location: 46404 - 47336 (+)
Gene ID: HRGMv2_4059_7_37
Type: TC
Location: 47329 - 48102 (+)
Gene ID: HRGMv2_4059_7_38
Type: pfam
Location: 48323 - 49285 (-)
Gene ID: HRGMv2_4059_7_39
Type: pfam
Location: 49342 - 50280 (-)
Gene ID: HRGMv2_4059_7_40
Type: TC
Location: 50460 - 51740 (+)
Gene ID: HRGMv2_4059_7_41
Type: pfam
Location: 51776 - 53179 (+)
Gene ID: HRGMv2_4059_7_42
Type: STP
Location: 53181 - 53720 (+)
Gene ID: HRGMv2_4059_7_43
Type: TC
Location: 53829 - 54599 (-)
Gene ID: HRGMv2_4059_7_44
Type: TC
Location: 54607 - 55410 (-)
Gene ID: HRGMv2_4059_7_45
Type: CAZyme
Location: 55474 - 56610 (-)
Gene ID: HRGMv2_4059_7_46
Type: TC
Location: 56617 - 57306 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List