Cluster: HRGMv2_4059_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4059
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4059_7 | HRGMv2_4059_7_17 | 25194 | 26276 | + | GH179 |
| pfam | HRGMv2_4059_7 | HRGMv2_4059_7_18 | 26293 | 27015 | + | ThuA |
| STP | HRGMv2_4059_7 | HRGMv2_4059_7_19 | 27035 | 27376 | + | FeoA |
| TC | HRGMv2_4059_7 | HRGMv2_4059_7_20 | 27373 | 29310 | + | 9.A.8.1.2 |
Gene ID: HRGMv2_4059_7_17
Type: CAZyme
Location: 25194 - 26276 (+)
Type: CAZyme
Location: 25194 - 26276 (+)
Gene ID: HRGMv2_4059_7_18
Type: pfam
Location: 26293 - 27015 (+)
Type: pfam
Location: 26293 - 27015 (+)
Gene ID: HRGMv2_4059_7_19
Type: STP
Location: 27035 - 27376 (+)
Type: STP
Location: 27035 - 27376 (+)
Gene ID: HRGMv2_4059_7_20
Type: TC
Location: 27373 - 29310 (+)
Type: TC
Location: 27373 - 29310 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp944368795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4059_7_17 | vegetarian > vegan | 2.48228 | 0.03783 |