Cluster: HRGMv2_4059_CGC6
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_4059
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4059_6 | HRGMv2_4059_6_101 | 100455 | 102197 | - | GH2 |
| CAZyme | HRGMv2_4059_6 | HRGMv2_4059_6_102 | 102256 | 104133 | - | GH43 |
| STP | HRGMv2_4059_6 | HRGMv2_4059_6_103 | 104246 | 106660 | - | SBP_bac_1 | SBP_bac_1 |
| CAZyme | HRGMv2_4059_6 | HRGMv2_4059_6_104 | 106682 | 108964 | - | GH43_33 |
| pfam | HRGMv2_4059_6 | HRGMv2_4059_6_105 | 108964 | 110586 | - | CBM_X2 | CBM_X2 |
| pfam | HRGMv2_4059_6 | HRGMv2_4059_6_106 | 110960 | 112162 | - | Big_2 |
| CAZyme | HRGMv2_4059_6 | HRGMv2_4059_6_107 | 112270 | 113190 | - | GH43_32 |
| NULL(UNKNOWN) | HRGMv2_4059_6 | HRGMv2_4059_6_108 | 113342 | 116404 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4059_6 | HRGMv2_4059_6_109 | 116419 | 118320 | - | GH43 |
| TC | HRGMv2_4059_6 | HRGMv2_4059_6_110 | 118349 | 119314 | - | 3.A.1.1.11 |
| TC | HRGMv2_4059_6 | HRGMv2_4059_6_111 | 119307 | 120299 | - | 3.A.1.1.41 |
Gene ID: HRGMv2_4059_6_101
Type: CAZyme
Location: 100455 - 102197 (-)
Type: CAZyme
Location: 100455 - 102197 (-)
Gene ID: HRGMv2_4059_6_102
Type: CAZyme
Location: 102256 - 104133 (-)
Type: CAZyme
Location: 102256 - 104133 (-)
Gene ID: HRGMv2_4059_6_103
Type: STP
Location: 104246 - 106660 (-)
Type: STP
Location: 104246 - 106660 (-)
Gene ID: HRGMv2_4059_6_104
Type: CAZyme
Location: 106682 - 108964 (-)
Type: CAZyme
Location: 106682 - 108964 (-)
Gene ID: HRGMv2_4059_6_105
Type: pfam
Location: 108964 - 110586 (-)
Type: pfam
Location: 108964 - 110586 (-)
Gene ID: HRGMv2_4059_6_106
Type: pfam
Location: 110960 - 112162 (-)
Type: pfam
Location: 110960 - 112162 (-)
Gene ID: HRGMv2_4059_6_107
Type: CAZyme
Location: 112270 - 113190 (-)
Type: CAZyme
Location: 112270 - 113190 (-)
Gene ID: HRGMv2_4059_6_108
Type:
Location: 113342 - 116404 (-)
Type:
Location: 113342 - 116404 (-)
Gene ID: HRGMv2_4059_6_109
Type: CAZyme
Location: 116419 - 118320 (-)
Type: CAZyme
Location: 116419 - 118320 (-)
Gene ID: HRGMv2_4059_6_110
Type: TC
Location: 118349 - 119314 (-)
Type: TC
Location: 118349 - 119314 (-)
Gene ID: HRGMv2_4059_6_111
Type: TC
Location: 119307 - 120299 (-)
Type: TC
Location: 119307 - 120299 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp944368795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.