Cluster: HRGMv2_4059_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4059
- CGC Family ID: CGCFAM_00674
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4059_18 | HRGMv2_4059_18_32 | 37241 | 38113 | - | 3.A.1.1.12 |
| TC | HRGMv2_4059_18 | HRGMv2_4059_18_33 | 38100 | 39020 | - | 3.A.1.1.34 |
| STP | HRGMv2_4059_18 | HRGMv2_4059_18_34 | 39035 | 40444 | - | SBP_bac_1 |
| CAZyme | HRGMv2_4059_18 | HRGMv2_4059_18_35 | 40477 | 43239 | - | CBM66 | GH43 |
Gene ID: HRGMv2_4059_18_32
Type: TC
Location: 37241 - 38113 (-)
Type: TC
Location: 37241 - 38113 (-)
Gene ID: HRGMv2_4059_18_33
Type: TC
Location: 38100 - 39020 (-)
Type: TC
Location: 38100 - 39020 (-)
Gene ID: HRGMv2_4059_18_34
Type: STP
Location: 39035 - 40444 (-)
Type: STP
Location: 39035 - 40444 (-)
Gene ID: HRGMv2_4059_18_35
Type: CAZyme
Location: 40477 - 43239 (-)
Type: CAZyme
Location: 40477 - 43239 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp944368795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.