Cluster: HRGMv2_4059_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4059
- CGC Family ID: CGCFAM_09792
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4059_12 | HRGMv2_4059_12_40 | 35144 | 35929 | - | 3.A.2.1.5 |
| NULL(UNKNOWN) | HRGMv2_4059_12 | HRGMv2_4059_12_41 | 36175 | 36639 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4059_12 | HRGMv2_4059_12_42 | 36710 | 37243 | - | Rubrerythrin |
| CAZyme | HRGMv2_4059_12 | HRGMv2_4059_12_43 | 37554 | 38519 | + | GH43_26 |
| CAZyme | HRGMv2_4059_12 | HRGMv2_4059_12_44 | 38738 | 41671 | - | GH38 |
Gene ID: HRGMv2_4059_12_40
Type: TC
Location: 35144 - 35929 (-)
Type: TC
Location: 35144 - 35929 (-)
Gene ID: HRGMv2_4059_12_41
Type:
Location: 36175 - 36639 (+)
Type:
Location: 36175 - 36639 (+)
Gene ID: HRGMv2_4059_12_42
Type: pfam
Location: 36710 - 37243 (-)
Type: pfam
Location: 36710 - 37243 (-)
Gene ID: HRGMv2_4059_12_43
Type: CAZyme
Location: 37554 - 38519 (+)
Type: CAZyme
Location: 37554 - 38519 (+)
Gene ID: HRGMv2_4059_12_44
Type: CAZyme
Location: 38738 - 41671 (-)
Type: CAZyme
Location: 38738 - 41671 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp944368795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.