Cluster: HRGMv2_4059_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4059
- CGC Family ID: CGCFAM_04505
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4059_8 | HRGMv2_4059_8_72 | 75554 | 76213 | + | 9.B.20.1.4 |
| NULL(UNKNOWN) | HRGMv2_4059_8 | HRGMv2_4059_8_73 | 76237 | 76329 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4059_8 | HRGMv2_4059_8_74 | 76339 | 78027 | + | FAD_binding_2 | GIDA | DAO | FAD_oxidored | NAD_binding_8 |
| CAZyme | HRGMv2_4059_8 | HRGMv2_4059_8_75 | 78047 | 79567 | + | GH13_44 |
Gene ID: HRGMv2_4059_8_72
Type: TC
Location: 75554 - 76213 (+)
Type: TC
Location: 75554 - 76213 (+)
Gene ID: HRGMv2_4059_8_73
Type:
Location: 76237 - 76329 (+)
Type:
Location: 76237 - 76329 (+)
Gene ID: HRGMv2_4059_8_74
Type: pfam
Location: 76339 - 78027 (+)
Type: pfam
Location: 76339 - 78027 (+)
Gene ID: HRGMv2_4059_8_75
Type: CAZyme
Location: 78047 - 79567 (+)
Type: CAZyme
Location: 78047 - 79567 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp944368795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.