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Cluster: HRGMv2_4059_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4059_8 HRGMv2_4059_8_58 50838 52082 + GH177
NULL(UNKNOWN) HRGMv2_4059_8 HRGMv2_4059_8_59 52171 53907 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4059_8 HRGMv2_4059_8_60 53928 54845 + BPD_transp_1
TC HRGMv2_4059_8 HRGMv2_4059_8_61 54838 55752 + 3.A.1.1.6
NULL(UNKNOWN) HRGMv2_4059_8 HRGMv2_4059_8_62 55766 58762 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4059_8 HRGMv2_4059_8_63 58771 60738 + GH163
pfam HRGMv2_4059_8 HRGMv2_4059_8_64 60752 64027 + Big_2 | Big_2 | Big_2
NULL(UNKNOWN) HRGMv2_4059_8 HRGMv2_4059_8_65 64103 67378 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4059_8 HRGMv2_4059_8_66 67466 69631 + GH112
CAZyme HRGMv2_4059_8 HRGMv2_4059_8_67 69616 71346 + GH2
Gene ID: HRGMv2_4059_8_58
Type: CAZyme
Location: 50838 - 52082 (+)
Gene ID: HRGMv2_4059_8_59
Type:
Location: 52171 - 53907 (+)
Gene ID: HRGMv2_4059_8_60
Type: pfam
Location: 53928 - 54845 (+)
Gene ID: HRGMv2_4059_8_61
Type: TC
Location: 54838 - 55752 (+)
Gene ID: HRGMv2_4059_8_62
Type:
Location: 55766 - 58762 (+)
Gene ID: HRGMv2_4059_8_63
Type: CAZyme
Location: 58771 - 60738 (+)
Gene ID: HRGMv2_4059_8_64
Type: pfam
Location: 60752 - 64027 (+)
Gene ID: HRGMv2_4059_8_65
Type:
Location: 64103 - 67378 (+)
Gene ID: HRGMv2_4059_8_66
Type: CAZyme
Location: 67466 - 69631 (+)
Gene ID: HRGMv2_4059_8_67
Type: CAZyme
Location: 69616 - 71346 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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