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Cluster: HRGMv2_4058_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4058_6 HRGMv2_4058_6_60 73284 74063 + 3.A.1.128.6
pfam HRGMv2_4058_6 HRGMv2_4058_6_61 74060 75235 + ABC2_membrane | ABC2_membrane_2 | ABC2_membrane_3 | ABC2_membrane_4
NULL(UNKNOWN) HRGMv2_4058_6 HRGMv2_4058_6_62 75332 76621 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4058_6 HRGMv2_4058_6_63 76776 78359 + 3.A.1.121.4
pfam HRGMv2_4058_6 HRGMv2_4058_6_64 78813 79187 + MGS
CAZyme HRGMv2_4058_6 HRGMv2_4058_6_65 79732 81741 + CBM48 | GH13_9
pfam HRGMv2_4058_6 HRGMv2_4058_6_66 81815 83005 + NTP_transferase | Hexapep_GlmU
pfam HRGMv2_4058_6 HRGMv2_4058_6_67 83026 84129 + NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_4058_6 HRGMv2_4058_6_68 84226 85878 + GT5
CAZyme HRGMv2_4058_6 HRGMv2_4058_6_69 86062 88500 + GT35
CAZyme HRGMv2_4058_6 HRGMv2_4058_6_70 88737 90560 + GH13_39
Gene ID: HRGMv2_4058_6_60
Type: TC
Location: 73284 - 74063 (+)
Gene ID: HRGMv2_4058_6_61
Type: pfam
Location: 74060 - 75235 (+)
Gene ID: HRGMv2_4058_6_62
Type:
Location: 75332 - 76621 (+)
Gene ID: HRGMv2_4058_6_63
Type: TC
Location: 76776 - 78359 (+)
Gene ID: HRGMv2_4058_6_64
Type: pfam
Location: 78813 - 79187 (+)
Gene ID: HRGMv2_4058_6_65
Type: CAZyme
Location: 79732 - 81741 (+)
Gene ID: HRGMv2_4058_6_66
Type: pfam
Location: 81815 - 83005 (+)
Gene ID: HRGMv2_4058_6_67
Type: pfam
Location: 83026 - 84129 (+)
Gene ID: HRGMv2_4058_6_68
Type: CAZyme
Location: 84226 - 85878 (+)
Gene ID: HRGMv2_4058_6_69
Type: CAZyme
Location: 86062 - 88500 (+)
Gene ID: HRGMv2_4058_6_70
Type: CAZyme
Location: 88737 - 90560 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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