Cluster: HRGMv2_4058_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4058
- CGC Family ID: CGCFAM_00268
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4058_6 | HRGMv2_4058_6_28 | 32760 | 34967 | + | CBM96 | GH50 |
| TC | HRGMv2_4058_6 | HRGMv2_4058_6_29 | 35167 | 36864 | + | 2.A.21.2.1 |
| TC | HRGMv2_4058_6 | HRGMv2_4058_6_30 | 37138 | 40794 | + | 3.A.12.1.1 |
| pfam | HRGMv2_4058_6 | HRGMv2_4058_6_31 | 40784 | 42157 | + | UPF0004 | Radical_SAM | TRAM_2 |
| TC | HRGMv2_4058_6 | HRGMv2_4058_6_32 | 42138 | 42779 | + | 4.F.1.1.8 |
Gene ID: HRGMv2_4058_6_28
Type: CAZyme
Location: 32760 - 34967 (+)
Type: CAZyme
Location: 32760 - 34967 (+)
Gene ID: HRGMv2_4058_6_29
Type: TC
Location: 35167 - 36864 (+)
Type: TC
Location: 35167 - 36864 (+)
Gene ID: HRGMv2_4058_6_30
Type: TC
Location: 37138 - 40794 (+)
Type: TC
Location: 37138 - 40794 (+)
Gene ID: HRGMv2_4058_6_31
Type: pfam
Location: 40784 - 42157 (+)
Type: pfam
Location: 40784 - 42157 (+)
Gene ID: HRGMv2_4058_6_32
Type: TC
Location: 42138 - 42779 (+)
Type: TC
Location: 42138 - 42779 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
RGIG4074
Species
RGIG4074 sp944376455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.